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Intron Name: Anas_platyrhynchos_platyrhynchos_2_42638790_42640803_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42638790 - 42640803

Intron Length:

2014

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATAAA

5'SS Class:

strong_major

3'SS Sequence:

TCCTCTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATAAAAT

U12 Branch Point Sequence:

AATATCTAAGCA

Flanking Amino Acid:

FLSVIYLTYTGYIAPWSGRF

Intron Amino Acid Position:

458

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.91

0.8

85.6

24.6

Major BPS

61.8

0.29

1.1

67.7

34.6

Major PPT

88.9

0.87

0.6

87.4

22.9

Minor 5ss

34.4

-1.8

2.8

41.8

44.8

Minor BPS

47.5

-0.1

1.9

59.45

40.1

Associated Gene:

Gene:

STT3B

Ensembl Gene ID:

ENSAPLG00000010692

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011208

42601778 - 42653202

51425

ENSAPLT00000026940

42601778 - 42649337

47560

ENSAPLT00000023042

42601778 - 42653920

52143