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Intron Name: Anas_platyrhynchos_platyrhynchos_2_42642533_42644238_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42642533 - 42644238

Intron Length:

1706

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

TTCCCCTCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTCAT

U12 Branch Point Sequence:

ATGTCATCAGTA

Flanking Amino Acid:

IKNINDERVFVALYAISAVY

Intron Amino Acid Position:

526

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

73.1

31.1

Major BPS

0.65

1.1

77.4

37.3

Major PPT

82.4

0.73

0.7

76.9

25.1

Minor 5ss

29.9

-2.3

3.3

42.5

Minor BPS

46.4

-0.2

59.47

40.4

Associated Gene:

Gene:

STT3B

Ensembl Gene ID:

ENSAPLG00000010692

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026940

42601778 - 42649337

47560

ENSAPLT00000023042

42601778 - 42653920

52143

ENSAPLT00000011208

42601778 - 42653202

51425