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Intron Name: Anas_platyrhynchos_platyrhynchos_2_42644451_42645230_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42644451 - 42645230

Intron Length:

780

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGGA

5'SS Class:

strong_major

3'SS Sequence:

TGTGTTTGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATTAAA

U12 Branch Point Sequence:

GTTGCCCTAACA

Flanking Amino Acid:

KRNPGNLYDKAGKVRKHVSE

Intron Amino Acid Position:

597

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.2

37.4

Major BPS

64.8

0.37

1.2

67.9

36.3

Major PPT

74.5

0.55

73.5

41.9

Minor 5ss

23.1

-3.1

3.2

43.5

Minor BPS

65.3

0.48

1.8

77.12

39.5

Associated Gene:

Gene:

STT3B

Ensembl Gene ID:

ENSAPLG00000010692

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026940

42601778 - 42649337

47560

ENSAPLT00000023042

42601778 - 42653920

52143

ENSAPLT00000011208

42601778 - 42653202

51425