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Intron Name: Anas_platyrhynchos_platyrhynchos_2_42646079_42647892_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42646079 - 42647892

Intron Length:

1814

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGGGG

5'SS Class:

major

3'SS Sequence:

TGCTATGATACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTATGAT

U12 Branch Point Sequence:

TTTGCTATGATA

Flanking Amino Acid:

NTWNNSHIALVGKAMSSNES

Intron Amino Acid Position:

717

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

60.5

44.3

Major BPS

72.3

0.55

1.1

63.4

42.8

Major PPT

0.41

1.1

61.1

43.6

Minor 5ss

28.8

-2.4

3.5

34.5

43.8

Minor BPS

0.15

1.7

70.63

35.9

Associated Gene:

Gene:

STT3B

Ensembl Gene ID:

ENSAPLG00000010692

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026940

42601778 - 42649337

47560

ENSAPLT00000023042

42601778 - 42653920

52143

ENSAPLT00000011208

42601778 - 42653202

51425