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Intron Name: Anas_platyrhynchos_platyrhynchos_2_42649226_42650324_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42649226 - 42650324

Intron Length:

1099

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TTAATCTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

ATATCTTCAACT

Flanking Amino Acid:

MSYYRFGEMQLDFRTPPGFD

Intron Amino Acid Position:

813

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

1.1

76.2

32.9

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

82.7

0.74

0.9

76.6

37.2

Minor 5ss

29.3

-2.4

2.9

33.7

41.5

Minor BPS

70.9

0.74

1.5

83.83

36.6

Associated Gene:

Gene:

STT3B

Ensembl Gene ID:

ENSAPLG00000010692

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023042

42601778 - 42653920

52143

ENSAPLT00000011208

42601778 - 42653202

51425