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Intron Name: Anas_platyrhynchos_platyrhynchos_2_42650538_42652588_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42650538 - 42652588

Intron Length:

2051

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTTCC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

CATTAACTAATA

Flanking Amino Acid:

VPKQKYLSKKTSKRKRGYIK

Intron Amino Acid Position:

884

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

0.9

71.9

34.5

Major BPS

77.9

0.69

0.8

75.9

Major PPT

0.97

0.5

16.2

Minor 5ss

34.6

-1.7

3.1

44.1

43.8

Minor BPS

-0.3

59.75

39.7

Associated Gene:

Gene:

STT3B

Ensembl Gene ID:

ENSAPLG00000010692

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023042

42601778 - 42653920

52143

ENSAPLT00000011208

42601778 - 42653202

51425