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Intron Name: Anas_platyrhynchos_platyrhynchos_2_42828457_42853238_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42828457 - 42853238

Intron Length:

24782

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATC|GTGAGTGGC

5'SS Class:

major

3'SS Sequence:

ATAACTTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTCCAT

U12 Branch Point Sequence:

TTCTCCATAACT

Flanking Amino Acid:

LPGLLMVAEIVLGLLVWTLI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.3

0.36

1.3

59.3

40.2

Major BPS

64.7

0.37

1.3

74.7

Major PPT

76.5

0.6

0.9

69.9

40.5

Minor 5ss

29.1

-2.4

3.1

35.1

35.5

Minor BPS

78.3

0.97

1.5

93.14

35.1

Associated Gene:

Gene:

CMTM8

Ensembl Gene ID:

ENSAPLG00000010095

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010512

42827905 - 42860305

32401