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Intron Name: Anas_platyrhynchos_platyrhynchos_2_42864343_42878603_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42864343 - 42878603

Intron Length:

14261

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTACGAAGG

5'SS Class:

major

3'SS Sequence:

TTTTGTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAC

U12 Branch Point Sequence:

AAACCTTTAACG

Flanking Amino Acid:

CAGMLKVAQMISLLVAFISI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

1.1

59.3

45.3

Major BPS

77.3

0.68

79.3

29.4

Major PPT

90.9

0.92

0.7

88.9

28.1

Minor 5ss

31.9

-2.1

3.1

37.2

42.1

Minor BPS

64.9

0.33

1.3

61.77

39.5

Associated Gene:

Gene:

CMTM7

Ensembl Gene ID:

ENSAPLG00000010014

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010420

42863937 - 42882530

18594