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Intron Name: Anas_platyrhynchos_platyrhynchos_2_42896039_42897526_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42896039 - 42897526

Intron Length:

1488

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TTCACTTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ACTTTTTTAATT

Flanking Amino Acid:

SSPVPAIMAYVFGFFASMAF

Intron Amino Acid Position:

134

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

83.8

34.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

80.6

0.69

0.8

75.4

32.9

Minor 5ss

42.6

-0.8

3.1

63.9

40.4

Minor BPS

74.1

0.84

1.1

81.14

35.2

Associated Gene:

Gene:

CMTM6

Ensembl Gene ID:

ENSAPLG00000026828

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025405

42855543 - 42902875

47333

ENSAPLT00000041630

42894012 - 42902875

8864