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Intron Name: Anas_platyrhynchos_platyrhynchos_2_42897626_42898283_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42897626 - 42898283

Intron Length:

658

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

TTTATGTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

AATTCCGTAACA

Flanking Amino Acid:

TFGKDKVEKVNFWAMLAIGV

Intron Amino Acid Position:

101

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

83.3

29.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

85.3

0.8

0.9

41.9

Minor 5ss

-0.6

3.2

62.3

43.4

Minor BPS

0.56

79.23

36.7

Associated Gene:

Gene:

CMTM6

Ensembl Gene ID:

ENSAPLG00000026828

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041630

42894012 - 42902875

8864

ENSAPLT00000025405

42855543 - 42902875

47333