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Intron Name: Anas_platyrhynchos_platyrhynchos_2_42898461_42902752_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42898461 - 42902752

Intron Length:

4292

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGGCCC

5'SS Class:

major

3'SS Sequence:

TATTTGTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTAAC

U12 Branch Point Sequence:

CTTGATCTAACA

Flanking Amino Acid:

WRLPAKVLQPFLSLLAVIFE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

57.8

41.3

Major BPS

75.8

0.64

0.9

75.6

25.3

Major PPT

86.3

0.82

0.8

80.9

36.4

Minor 5ss

27.1

-2.6

3.1

35.1

Minor BPS

48.7

-0.1

64.55

Associated Gene:

Gene:

CMTM6

Ensembl Gene ID:

ENSAPLG00000026828

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041630

42894012 - 42902875

8864

ENSAPLT00000025405

42855543 - 42902875

47333