Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_42910725_42910886_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42910725 - 42910886

Intron Length:

162

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCTTTT

5'SS Class:

major

3'SS Sequence:

CTCCACCTTGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAA

U12 Branch Point Sequence:

CCCCCCTCCACC

Flanking Amino Acid:

GSKKIDPNMKAGATSEGVLA

Intron Amino Acid Position:

441

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.2

37.9

Major BPS

70.8

0.52

70.6

31.6

Major PPT

71.9

0.49

0.8

65.5

Minor 5ss

52.2

0.08

2.8

76.1

39.6

Minor BPS

45.8

-0.3

51.61

45.6

Associated Gene:

Gene:

DYNC1LI1

Ensembl Gene ID:

ENSAPLG00000008868

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048107

42908916 - 42931540

22625

ENSAPLT00000009306

42908916 - 42931540

22625