Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_42912036_42912155_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42912036 - 42912155

Intron Length:

120

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTTTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTACAT

U12 Branch Point Sequence:

CTAACATTACAT

Flanking Amino Acid:

DDQVFLMKQQSQLAKQPPTA

Intron Amino Acid Position:

386

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

1.1

82.3

32.2

Major BPS

73.9

0.59

30.2

Major PPT

95.8

1.03

0.5

92.1

18.3

Minor 5ss

51.2

0.04

2.5

70.2

40.4

Minor BPS

46.3

-0.2

64.29

45.2

Associated Gene:

Gene:

DYNC1LI1

Ensembl Gene ID:

ENSAPLG00000008868

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009306

42908916 - 42931540

22625