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Intron Name: Anas_platyrhynchos_platyrhynchos_2_42912216_42913374_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42912216 - 42913374

Intron Length:

1159

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATTAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTATTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

TTCCAGTTAAAA

Flanking Amino Acid:

DNIRKPPVRKFVHEKEIVAE

Intron Amino Acid Position:

366

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

82.6

24.7

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

0.83

0.8

81.8

34.6

Minor 5ss

38.9

-1.3

2.9

47.2

Minor BPS

46.9

-0.2

2.3

63.19

42.6

Associated Gene:

Gene:

DYNC1LI1

Ensembl Gene ID:

ENSAPLG00000008868

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048107

42908916 - 42931540

22625

ENSAPLT00000009306

42908916 - 42931540

22625