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Intron Name: Anas_platyrhynchos_platyrhynchos_2_42940346_42940448_F

Intron Information:

Intron Rank:

126922

Intron Class:

major

Intron Phase:

Intron Coordinates:

42940346 - 42940448

Intron Length:

103

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAGGTATT

5'SS Class:

major

3'SS Sequence:

CATGTTCTTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTATCA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

84.6

33.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

74.8

0.56

0.9

66.1

40.5

Minor 5ss

-0.9

3.2

59.7

39.1

Minor BPS

71.9

0.68

1.5

82.41

32.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018380

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047073

42938535 - 42940613

2079