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Intron Name: Anas_platyrhynchos_platyrhynchos_2_42960986_42963786_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42960986 - 42963786

Intron Length:

2801

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGCGGG

5'SS Class:

major

3'SS Sequence:

GTCCACTTTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATCAT

U12 Branch Point Sequence:

TTTTTTGTAATC

Flanking Amino Acid:

MAADKAADQGTEKHEGA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

45.2

Major BPS

80.4

0.76

80.3

31.8

Major PPT

75.8

0.58

0.9

68.1

37.2

Minor 5ss

29.9

-2.3

3.2

29.1

43.5

Minor BPS

61.9

0.35

33.7

Associated Gene:

Gene:

CNOT10

Ensembl Gene ID:

ENSAPLG00000008609

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008997

42960964 - 42988924

27961