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Intron Name: Anas_platyrhynchos_platyrhynchos_2_42973166_42974717_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42973166 - 42974717

Intron Length:

1552

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTTAG

U12 Branch Point Sequence:

TTTTCTTTCTTT

Flanking Amino Acid:

AECCIAANKGTSEQETKGLP

Intron Amino Acid Position:

406

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

71.1

40.4

Major BPS

58.7

0.22

1.5

57.4

41.4

Major PPT

88.5

0.87

0.6

88.2

21.6

Minor 5ss

32.6

-2

3.1

35.3

41.4

Minor BPS

46.2

-0.2

3.6

83.14

Associated Gene:

Gene:

CNOT10

Ensembl Gene ID:

ENSAPLG00000008609

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008997

42960964 - 42988924

27961