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Intron Name: Anas_platyrhynchos_platyrhynchos_2_42977170_42982536_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42977170 - 42982536

Intron Length:

5367

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CTTTTTTTATGC

Flanking Amino Acid:

PLKKQELENLRCSILACSAY

Intron Amino Acid Position:

532

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.6

1.15

0.7

84.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

89.7

0.89

0.6

82.1

29.9

Minor 5ss

24.7

-2.9

3.6

32.7

42.2

Minor BPS

51.1

0.01

1.9

64.74

41.8

Associated Gene:

Gene:

CNOT10

Ensembl Gene ID:

ENSAPLG00000008609

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008997

42960964 - 42988924

27961