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Intron Name: Anas_platyrhynchos_platyrhynchos_2_42984134_42984835_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42984134 - 42984835

Intron Length:

702

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTACTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

CTGTTTTTACTT

Flanking Amino Acid:

LGISSNEQDQGSDKGENEAM

Intron Amino Acid Position:

614

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

1.1

78.8

30.1

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

85.9

0.81

0.7

81.6

29.9

Minor 5ss

28.4

-2.5

2.9

32.1

42.4

Minor BPS

56.4

0.28

1.6

70.08

42.4

Associated Gene:

Gene:

CNOT10

Ensembl Gene ID:

ENSAPLG00000008609

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008997

42960964 - 42988924

27961