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Intron Name: Anas_platyrhynchos_platyrhynchos_2_43001687_43011135_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43001687 - 43011135

Intron Length:

9449

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGATAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGTTGAT

U12 Branch Point Sequence:

TGATCCCGAAAT

Flanking Amino Acid:

DAQQGRQAIQLSIEQAQAVA

Intron Amino Acid Position:

381

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.7

0.98

0.8

81.2

26.3

Major BPS

63.5

0.33

1.4

57.1

49.4

Major PPT

95.4

1.02

0.6

88.7

28.3

Minor 5ss

38.2

-1.3

3.1

49.9

46.6

Minor BPS

51.5

0.12

1.9

73.58

41.9

Associated Gene:

Gene:

TRIM71

Ensembl Gene ID:

ENSAPLG00000008589

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008934

42997407 - 43051311

53905