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Intron Name: Anas_platyrhynchos_platyrhynchos_2_43087012_43089871_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43087012 - 43089871

Intron Length:

2860

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTGTT

5'SS Class:

major

3'SS Sequence:

CTTCCTTTGCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAT

U12 Branch Point Sequence:

GTCCCCGTATGT

Flanking Amino Acid:

EARENLKRKEEMMITEKELI

Intron Amino Acid Position:

421

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

35.3

Major BPS

82.2

0.8

0.9

81.6

Major PPT

73.8

0.53

0.9

Minor 5ss

39.9

-1.1

3.4

54.7

43.6

Minor BPS

42.6

-0.4

2.4

61.73

47.8

Associated Gene:

Gene:

TCAIM

Ensembl Gene ID:

ENSAPLG00000008202

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021007

43086288 - 43104911

18624

ENSAPLT00000008542

43086288 - 43104071

17784