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Intron Name: Anas_platyrhynchos_platyrhynchos_2_43090004_43092953_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43090004 - 43092953

Intron Length:

2950

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTATT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCATTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TGGTTTTTATTT

Flanking Amino Acid:

SLRGLQMILESDRYTPSLHE

Intron Amino Acid Position:

377

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.94

0.9

90.9

28.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

83.8

0.76

0.8

77.5

35.6

Minor 5ss

40.3

-1.1

3.2

59.2

45.4

Minor BPS

57.8

0.32

1.6

71.48

40.5

Associated Gene:

Gene:

TCAIM

Ensembl Gene ID:

ENSAPLG00000008202

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021007

43086288 - 43104911

18624

ENSAPLT00000008542

43086288 - 43104071

17784