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Intron Name: Anas_platyrhynchos_platyrhynchos_2_43093187_43094600_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43093187 - 43094600

Intron Length:

1414

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

TGTGCCTGCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

TGTGCCTGCACA

Flanking Amino Acid:

TMDVHHHWTKIFERLPNYYK

Intron Amino Acid Position:

300

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

84.4

26.9

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

67.1

0.39

60.7

40.3

Minor 5ss

45.6

-0.5

3.1

65.7

39.5

Minor BPS

52.1

0.06

2.1

69.02

43.1

Associated Gene:

Gene:

TCAIM

Ensembl Gene ID:

ENSAPLG00000008202

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008542

43086288 - 43104071

17784

ENSAPLT00000021007

43086288 - 43104911

18624