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Intron Name: Anas_platyrhynchos_platyrhynchos_2_43118984_43119508_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43118984 - 43119508

Intron Length:

525

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCTTG

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTGCCGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTCAT

U12 Branch Point Sequence:

GTTCATAGAAAT

Flanking Amino Acid:

SLDGATWVLRESEWTTNTPL

Intron Amino Acid Position:

1149

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.9

78.8

38.3

Major BPS

0.65

1.1

77.4

37.3

Major PPT

80.6

0.69

0.8

76.5

32.1

Minor 5ss

47.5

-0.2

2.8

64.1

47.4

Minor BPS

43.1

-0.4

1.9

63.15

39.8

Associated Gene:

Gene:

TOPAZ1

Ensembl Gene ID:

ENSAPLG00000026179

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044724

43113062 - 43150404

37343