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Intron Name: Anas_platyrhynchos_platyrhynchos_2_43126226_43127708_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43126226 - 43127708

Intron Length:

1483

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGCCTT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCCCTGAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TAAGTTTTAATA

Flanking Amino Acid:

EINVVLNIKSRYQERHFKSS

Intron Amino Acid Position:

979

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

74.4

41.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

72.3

0.5

72.6

26.1

Minor 5ss

49.9

-0

2.8

73.5

43.2

Minor BPS

60.8

0.34

1.3

64.37

36.5

Associated Gene:

Gene:

TOPAZ1

Ensembl Gene ID:

ENSAPLG00000026179

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044724

43113062 - 43150404

37343