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Intron Name: Anas_platyrhynchos_platyrhynchos_2_43134383_43134907_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43134383 - 43134907

Intron Length:

525

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

ATTTTATTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTTGTTTTAATT

Flanking Amino Acid:

EPWTTDRNAKASHSVQQILE

Intron Amino Acid Position:

792

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

77.3

26.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

82.4

0.73

0.8

74.9

39.5

Minor 5ss

36.8

-1.5

2.9

43.7

38.1

Minor BPS

67.3

0.62

1.4

78.3

39.3

Associated Gene:

Gene:

TOPAZ1

Ensembl Gene ID:

ENSAPLG00000026179

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044724

43113062 - 43150404

37343