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Intron Name: Anas_platyrhynchos_platyrhynchos_2_43314224_43315689_R


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
43314224 - 43315689

Intron Length:
1466

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATT|GTAAGTTCA

5'SS Class:
major

3'SS Sequence:
CTTTGTCCTCTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTGAC

U12 Branch Point Sequence:
TCCTTTTGACCT

Flanking Amino Acid:
LRPNSYVKTIAILGAGHYVY

Intron Amino Acid Position:
317

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.5
0.63
1
72.4
32.9

Major BPS
86.5
0.91
0.8
77.4
37.4

Major PPT
78.3
0.64
0.8
70.3
36.4

Minor 5ss
43.1
-0.8
2.8
56.6
41.9

Minor BPS
49.7
0.05
1.7
67.31
44.2

Associated Gene:

Gene:
ABHD5

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

43312442 - 43342901
30460

43312442 - 43324275
11834