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Intron Name: Anas_platyrhynchos_platyrhynchos_2_43316541_43319150_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
43316541 - 43319150

Intron Length:
2610

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TTG|GTGAGTTTT

5'SS Class:
strong_major

3'SS Sequence:
TCTGTTTTGACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTCTAAT

U12 Branch Point Sequence:
ATTTCTCTAATT

Flanking Amino Acid:
LAGLRIAGPFGLSLVQRLRP

Intron Amino Acid Position:
217

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
87
0.87
0.8
85.7
25.5

Major BPS
82.2
0.8
0.9
81.6
27

Major PPT
78.7
0.64
1
75.5
38.3

Minor 5ss
40.8
-1
3
55
43.6

Minor BPS
70.5
0.72
1.6
87
32.2

Associated Gene:

Gene:
ABHD5

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

43312442 - 43342901
30460

43312442 - 43324275
11834