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Intron Name: Anas_platyrhynchos_platyrhynchos_2_43319306_43322274_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
43319306 - 43322274

Intron Length:
2969

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTATGTGAA

5'SS Class:
strong_major

3'SS Sequence:
TTTCTGCCAACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTCTCAA

U12 Branch Point Sequence:
GTACTCTCAACC

Flanking Amino Acid:
AAAYSLKYPSRVKHLILVEP

Intron Amino Acid Position:
165

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
88.2
0.9
0.8
79.4
28.9

Major BPS
73.4
0.58
0.9
75.3
29.7

Major PPT
75.1
0.57
0.9
70.3
35.1

Minor 5ss
38.1
-1.3
3.1
48.5
47.7

Minor BPS
58.3
0.24
1.6
66.01
38.8

Associated Gene:

Gene:
ABHD5

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

43312442 - 43342901
30460

43312442 - 43324275
11834