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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_43438736_43474316_F

Intron Information:

Intron Rank:
10
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
43438736 - 43474316
Intron Length:
35581

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CAG|GTAAGGGTA
5'SS Class:
strong_major
3'SS Sequence:
ACTTCTCTCACAG|C
3'SS Class:
major_PPT
U2 Branch Point Sequence:
ATTTAAT
U12 Branch Point Sequence:
TCTTTCTTACTT
Flanking Amino Acid:
FESLEALKQQQMKLAAESLK
Intron Amino Acid Position:
589

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
91.2
0.97
0.8
82.2
30.9
Major BPS
90.7
1.01
0.7
90
19.9
Major PPT
78.7
0.65
0.8
72.5
31.6
Minor 5ss
32.8
-2
3.7
46.2
49.1
Minor BPS
69.1
0.68
1.6
82.74
39.5

Associated Gene:

Gene:
ANO10
Ensembl Gene ID:
ENSAPLG00000007607
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000026257
43363507 - 43474352
110846
ENSAPLT00000024257
43363507 - 43474352
110846