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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_43465766_43474316_F

Intron Information:

Intron Rank:
12
Intron Class:
major
Intron Phase:
1
Intron Coordinates:
43465766 - 43474316
Intron Length:
8551

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAG|GTAGGGCAA
5'SS Class:
major
3'SS Sequence:
ACTTCTCTCACAG|C
3'SS Class:
major_PPT
U2 Branch Point Sequence:
ATTTAAT
U12 Branch Point Sequence:
TCTTTCTTACTT
Flanking Amino Acid:
LLEMIWAGQEANETCG*
Intron Amino Acid Position:
665

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
78.9
0.68
1
65.8
41.7
Major BPS
90.7
1.01
0.7
90
19.9
Major PPT
78.7
0.65
0.8
72.5
31.6
Minor 5ss
28.7
-2.4
3.4
37.4
47.3
Minor BPS
69.1
0.68
1.6
82.74
39.5

Associated Gene:

Gene:
ANO10
Ensembl Gene ID:
ENSAPLG00000007607
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000023540
43363507 - 43474336
110830