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Intron Name: Anas_platyrhynchos_platyrhynchos_2_43488885_43491295_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43488885 - 43491295

Intron Length:

2411

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTAGA

5'SS Class:

major

3'SS Sequence:

TTTTTATTCACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TATTTTTTATTC

Flanking Amino Acid:

VPPHVSKECKDLITRMLQRD

Intron Amino Acid Position:

244

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.62

71.7

40.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

88.8

0.87

0.7

84.3

29.4

Minor 5ss

36.4

-1.5

2.7

38.9

40.3

Minor BPS

62.3

0.36

1.5

70.52

35.3

Associated Gene:

Gene:

SNRK

Ensembl Gene ID:

ENSAPLG00000012638

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028922

43481474 - 43508755

27282

ENSAPLT00000013163

43482350 - 43508755

26406