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Intron Name: Anas_platyrhynchos_platyrhynchos_2_4363299_4367675_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4363299 - 4367675

Intron Length:

4377

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTTTATTTA

5'SS Class:

weak_major

3'SS Sequence:

CATGAACCGCAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCGCAT

U12 Branch Point Sequence:

TCCGCATGAACC

Flanking Amino Acid:

LNLIRHQRLHMS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.4

0.15

1.2

64.2

Major BPS

57.4

0.18

1.4

67.6

40.6

Major PPT

47.2

-0.1

1.1

38.9

Minor 5ss

-0.2

2.5

63.1

41.8

Minor BPS

49.2

-0

1.9

60.1

44.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027330

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025627

4363293 - 4370601

7309