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Intron Name: Anas_platyrhynchos_platyrhynchos_2_43685425_43686093_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43685425 - 43686093

Intron Length:

669

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTATGTACC

5'SS Class:

major

3'SS Sequence:

ATTTTTCTTTAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTGAT

U12 Branch Point Sequence:

TTTTTCTTTAAG

Flanking Amino Acid:

LSKYKIVTFLGLYNNQITDV

Intron Amino Acid Position:

760

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

71.5

38.6

Major BPS

72.4

0.56

1.2

63.1

44.4

Major PPT

79.7

0.67

84.1

30.5

Minor 5ss

42.6

-0.8

2.4

47.1

41.5

Minor BPS

62.2

0.24

1.8

72.26

40.2

Associated Gene:

Gene:

NOD1

Ensembl Gene ID:

ENSAPLG00000003385

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033662

43676760 - 43694657

17898

ENSAPLT00000003460

43675567 - 43694259

18693

ENSAPLT00000043580

43676239 - 43694657

18419