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Intron Name: Anas_platyrhynchos_platyrhynchos_2_43838461_43842734_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43838461 - 43842734

Intron Length:

4274

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTGTG

5'SS Class:

major

3'SS Sequence:

TCTTTGATACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

CTTTCTTTGATA

Flanking Amino Acid:

DVTITLPHIPGSTPPRTVFK

Intron Amino Acid Position:

235

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.62

70.3

40.5

Major BPS

0.85

0.9

39.9

Major PPT

74.2

0.54

67.2

42.6

Minor 5ss

38.5

-1.3

3.3

54.8

43.4

Minor BPS

74.1

0.75

1.1

77.53

33.6

Associated Gene:

Gene:

EAF1

Ensembl Gene ID:

ENSAPLG00000030137

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038510

43824356 - 43846329

21974