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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_43847758_43848424_F

Intron Information:

Intron Rank:
2
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
43847758 - 43848424
Intron Length:
667

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
GAG|GTGAGTCTT
5'SS Class:
strong_major
3'SS Sequence:
TCTTCCTCCCCAG|T
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
AAATGAT
U12 Branch Point Sequence:
TTGTTTTGGATG
Flanking Amino Acid:
EFEELKACREFADQKLTILE
Intron Amino Acid Position:
95

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
92.9
1.01
0.7
86.9
30.1
Major BPS
68
0.45
1
57.8
39
Major PPT
80.9
0.7
0.7
73.2
31.7
Minor 5ss
34.7
-1.7
3.1
49.5
46.7
Minor BPS
50.2
-0.1
1.5
57.65
38.9

Associated Gene:

Gene:
METTL6
Ensembl Gene ID:
ENSAPLG00000003082
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000003142
43846760 - 43855527
8768