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Intron Name: Anas_platyrhynchos_platyrhynchos_2_43880156_43881558_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43880156 - 43881558

Intron Length:

1403

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGAG

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

ACACATTTAACA

Flanking Amino Acid:

EEEEVDPRIQGELEKLNQST

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.1

37.5

Major BPS

0.92

0.9

86.2

29.1

Major PPT

91.6

0.94

0.6

84.4

30.5

Minor 5ss

23.1

-3.1

3.2

27.7

44.2

Minor BPS

56.1

0.19

1.5

61.2

38.4

Associated Gene:

Gene:

SH3BP5

Ensembl Gene ID:

ENSAPLG00000002814

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002861

43879392 - 43953896

74505