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Intron Name: Anas_platyrhynchos_platyrhynchos_2_43931485_43931969_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43931485 - 43931969

Intron Length:

485

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTATGTACT

5'SS Class:

strong_major

3'SS Sequence:

TTTTACAACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAA

U12 Branch Point Sequence:

TCTGCTTTTACA

Flanking Amino Acid:

KQNTIHYTIRVYSLCKFTFS

Intron Amino Acid Position:

671

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

77.1

37.8

Major BPS

73.5

0.59

81.3

29.9

Major PPT

72.6

0.51

66.8

38.1

Minor 5ss

-0.6

2.5

52.7

Minor BPS

60.6

0.33

1.8

70.62

41.9

Associated Gene:

Gene:

CAPN7

Ensembl Gene ID:

ENSAPLG00000001885

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035520

43925823 - 43952389

26567

ENSAPLT00000002011

43925823 - 43954249

28427