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Intron Name: Anas_platyrhynchos_platyrhynchos_2_43932116_43934478_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43932116 - 43934478

Intron Length:

2363

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

GATTTTTTGATG

Flanking Amino Acid:

KTDGKKVYYPADPPPYIDGI

Intron Amino Acid Position:

622

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

88.3

26.6

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

0.99

0.5

92.6

17.2

Minor 5ss

35.7

-1.6

2.6

43.1

43.8

Minor BPS

58.9

0.14

1.3

58.91

37.3

Associated Gene:

Gene:

CAPN7

Ensembl Gene ID:

ENSAPLG00000001885

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035520

43925823 - 43952389

26567

ENSAPLT00000002011

43925823 - 43954249

28427