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Intron Name: Anas_platyrhynchos_platyrhynchos_2_43934555_43934985_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43934555 - 43934985

Intron Length:

431

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCCAAGT

5'SS Class:

major

3'SS Sequence:

TGTGTTTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTAAT

U12 Branch Point Sequence:

CTCTACTTAATT

Flanking Amino Acid:

VLLSRHITDKDDFAHNREFI

Intron Amino Acid Position:

597

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.7

0.35

1.2

62.6

43.6

Major BPS

78.2

0.7

77.9

32.1

Major PPT

81.5

0.71

0.8

76.5

37.7

Minor 5ss

34.2

-1.8

3.2

49.6

46.3

Minor BPS

70.2

0.71

1.5

80.51

41.8

Associated Gene:

Gene:

CAPN7

Ensembl Gene ID:

ENSAPLG00000001885

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002011

43925823 - 43954249

28427

ENSAPLT00000035520

43925823 - 43952389

26567