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Intron Name: Anas_platyrhynchos_platyrhynchos_2_43935122_43936437_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43935122 - 43936437

Intron Length:

1316

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGGTCCA

5'SS Class:

major

3'SS Sequence:

GCATTGCTTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGAT

U12 Branch Point Sequence:

TCCTACTGATCT

Flanking Amino Acid:

SLFKESTCIHSTWDAKQGPV

Intron Amino Acid Position:

551

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.2

63.7

42.4

Major BPS

83.5

0.83

0.8

71.6

36.4

Major PPT

67.9

0.4

58.3

42.9

Minor 5ss

29.5

-2.4

2.8

34.1

41.3

Minor BPS

49.5

0.04

1.9

69.67

46.7

Associated Gene:

Gene:

CAPN7

Ensembl Gene ID:

ENSAPLG00000001885

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002011

43925823 - 43954249

28427

ENSAPLT00000035520

43925823 - 43952389

26567