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Intron Name: Anas_platyrhynchos_platyrhynchos_2_43936538_43937508_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43936538 - 43937508

Intron Length:

971

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAATAAAG

5'SS Class:

major

3'SS Sequence:

AGTCCCTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAGCAA

U12 Branch Point Sequence:

CAAACAGTAACA

Flanking Amino Acid:

DPRTAQKIDNGIFWIAWEDL

Intron Amino Acid Position:

518

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.3

0.55

66.2

Major BPS

48.5

-0

1.4

38.9

Major PPT

73.6

0.53

0.8

70.3

35.7

Minor 5ss

-1.9

2.9

37.5

41.1

Minor BPS

44.9

-0.3

2.2

55.62

42.6

Associated Gene:

Gene:

CAPN7

Ensembl Gene ID:

ENSAPLG00000001885

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002011

43925823 - 43954249

28427

ENSAPLT00000035520

43925823 - 43952389

26567