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Intron Name: Anas_platyrhynchos_platyrhynchos_2_43939368_43940975_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43939368 - 43940975

Intron Length:

1608

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTAGT

5'SS Class:

major

3'SS Sequence:

GTTTGTATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTTCTTTTGAAT

Flanking Amino Acid:

GGYDFPGSNSNIDLHALTGW

Intron Amino Acid Position:

394

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.1

75.1

40.8

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

81.5

0.71

0.9

78.1

40.1

Minor 5ss

40.4

-1.1

2.9

61.4

42.9

Minor BPS

63.8

0.52

1.4

81.08

34.1

Associated Gene:

Gene:

CAPN7

Ensembl Gene ID:

ENSAPLG00000001885

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035520

43925823 - 43952389

26567

ENSAPLT00000002011

43925823 - 43954249

28427