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Intron Name: Anas_platyrhynchos_platyrhynchos_2_43943871_43944644_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43943871 - 43944644

Intron Length:

774

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCTTTATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTAAA

U12 Branch Point Sequence:

TTTTCTTTATAG

Flanking Amino Acid:

YTVSSFSIKQTIVSDCSFVA

Intron Amino Acid Position:

285

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.5

1.1

0.7

87.9

29.3

Major BPS

67.4

0.43

1.1

67.9

36.3

Major PPT

88.2

0.86

0.6

24.2

Minor 5ss

41.9

-0.9

2.9

58.7

45.8

Minor BPS

0.3

1.8

72.46

40.4

Associated Gene:

Gene:

CAPN7

Ensembl Gene ID:

ENSAPLG00000001885

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035520

43925823 - 43952389

26567

ENSAPLT00000002011

43925823 - 43954249

28427