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Intron Name: Anas_platyrhynchos_platyrhynchos_2_43944772_43945621_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43944772 - 43945621

Intron Length:

850

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTC|GTAAGTGCT

5'SS Class:

major

3'SS Sequence:

CTCTCAAATCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAA

U12 Branch Point Sequence:

CCTCTCTCAAAT

Flanking Amino Acid:

RERFAFPMPFSDKCGKLPLS

Intron Amino Acid Position:

242

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.9

0.52

1.3

71.5

38.5

Major BPS

73.4

0.58

0.9

75.3

29.7

Major PPT

64.6

0.33

0.9

56.1

38.1

Minor 5ss

36.9

-1.5

3.3

51.3

39.7

Minor BPS

50.6

0.1

1.7

66.47

Associated Gene:

Gene:

CAPN7

Ensembl Gene ID:

ENSAPLG00000001885

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002011

43925823 - 43954249

28427

ENSAPLT00000035520

43925823 - 43952389

26567