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Intron Name: Anas_platyrhynchos_platyrhynchos_2_43945709_43947164_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43945709 - 43947164

Intron Length:

1456

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TTACGATTTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAC

U12 Branch Point Sequence:

TTTCTCTTACGA

Flanking Amino Acid:

RYTAEEIEVLRKTSKINGIE

Intron Amino Acid Position:

213

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.5

1.07

0.7

84.1

30.2

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

76.5

0.6

0.9

69.1

40.7

Minor 5ss

39.6

-1.2

2.8

49.9

46.3

Minor BPS

0.18

1.9

72.02

40.3

Associated Gene:

Gene:

CAPN7

Ensembl Gene ID:

ENSAPLG00000001885

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002011

43925823 - 43954249

28427

ENSAPLT00000035520

43925823 - 43952389

26567