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Intron Name: Anas_platyrhynchos_platyrhynchos_2_43947366_43948240_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43947366 - 43948240

Intron Length:

875

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TTATTTGCTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

GCATTTTTATTT

Flanking Amino Acid:

LKQLARQALDRAEALKVSMS

Intron Amino Acid Position:

146

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.7

1.05

0.6

92.2

16.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

79.1

0.66

0.9

78.1

36.2

Minor 5ss

33.9

-1.8

2.8

41.8

44.8

Minor BPS

52.5

0.16

1.5

64.37

40.9

Associated Gene:

Gene:

CAPN7

Ensembl Gene ID:

ENSAPLG00000001885

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035520

43925823 - 43952389

26567

ENSAPLT00000002011

43925823 - 43954249

28427