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Intron Name: Anas_platyrhynchos_platyrhynchos_2_43986458_43986521_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

43986458 - 43986521

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTC|GTGATTGGC

5'SS Class:

weak_major

3'SS Sequence:

ATTGAACAAATAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TAATATTGAACA

Flanking Amino Acid:

QYASAPKKEFGGGTRTGDAL

Intron Amino Acid Position:

280

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.1

0.12

1.3

52.1

39.3

Major BPS

90.7

1.01

0.7

19.9

Major PPT

52.4

0.05

45.9

Minor 5ss

29.2

-2.4

3.1

35.1

35.5

Minor BPS

57.5

0.23

1.6

67.81

37.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029031

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045664

43983735 - 43989264

5530