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Intron Name: Anas_platyrhynchos_platyrhynchos_2_44141715_44143050_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44141715 - 44143050

Intron Length:

1336

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAAGATT

5'SS Class:

major

3'SS Sequence:

TGTTTCATTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

TATTGCTGAATT

Flanking Amino Acid:

EPLWKKYISQFKNPLIMLLL

Intron Amino Acid Position:

104

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.9

0.52

1.2

37.7

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

84.9

0.79

0.8

82.2

34.1

Minor 5ss

33.9

-1.8

3.3

49.1

46.8

Minor BPS

63.2

0.49

1.9

82.19

39.2

Associated Gene:

Gene:

ATP2C1

Ensembl Gene ID:

ENSAPLG00000010766

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035723

44136785 - 44173584

36800

ENSAPLT00000011254

44135711 - 44173584

37874

ENSAPLT00000004952

44138733 - 44173584

34852