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Intron Name: Anas_platyrhynchos_platyrhynchos_2_44143141_44145910_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44143141 - 44145910

Intron Length:

2770

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGGAAC

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTCTCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTTAT

U12 Branch Point Sequence:

TTTATCTTATCT

Flanking Amino Acid:

QFDDAVSITVAILIVVTVAF

Intron Amino Acid Position:

126

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

74.8

35.1

Major BPS

82.6

0.81

0.8

71.7

Major PPT

85.3

0.79

0.8

80.9

31.1

Minor 5ss

32.7

-2

3.1

39.8

40.4

Minor BPS

71.1

0.74

1.6

88.37

36.6

Associated Gene:

Gene:

ATP2C1

Ensembl Gene ID:

ENSAPLG00000010766

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011254

44135711 - 44173584

37874

ENSAPLT00000035723

44136785 - 44173584

36800

ENSAPLT00000032170

44136785 - 44172542

35758